The “amelia” Function in R

  • Package: Amelia

  • Purpose: Impute missing data using multiple imputation.

  • General class: Imputation

  • Required argument(s):

    • x: A data frame with missing values.

  • Notable optional arguments:

    • m: Number of multiple imputations to generate (default is 5).

    • idvars: Variables to be used as ID variables.

    • ts: Time-series variable.

    • polytime: Degree of the polynomial for time trends.

    • emburn: Number of EM and burn-in iterations.

    • bounds: Bounds for imputed values.

    • boot.type: Type of bootstrap used.

  • Example:

  • # Load the required library
    library(Amelia)

    # Create a sample dataset with missing values
    data <- data.frame(
    id = 1:10,
    time = 1:10,
    x1 = c(1, 2, NA, 4, 5, 6, NA, 8, 9, 10),
    x2 = c(5, NA, 7, 8, 9, 10, 11, 12, NA, 15)
    )

    # Perform multiple imputation using the amelia function
    amelia_output <- amelia(x = data, m = 5, idvars = "id", ts = "time")

    # View the imputed datasets
    summary(amelia_output)

  • In this example, the amelia function from the Amelia package is used to perform multiple imputation on a sample dataset with missing values. The dataset data contains missing values in columns x1 and x2. The amelia function generates 5 imputed datasets (m = 5) and specifies id as the ID variable and time as the time-series variable. The summary function is then used to view the imputed datasets.

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